SOM cluster: 1395

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 134
Promoter: 4%
CpG-Island: 3%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 57/100 | e-val: 0
Factore-val(match)DB
TAL1::TCF30.000008446JASPAR
ARID3A0.000047699JASPAR
Prrx20.000091296JASPAR
Tcfcp2l10.00027642JASPAR
Pdx10.00054907JASPAR
Sites: 23/100 | e-val: 0.012
Factore-val(match)DB
EWSR1-FLI10.0000010289JASPAR
znf1430.0020666JASPAR
TLX1::NFIC0.0030045JASPAR
TFAP2A0.0083644JASPAR
SP10.027675JASPAR
Sites: 37/100 | e-val: 0.076
Factore-val(match)DB
TAL1::TCF30.000000033163JASPAR
Hand1::Tcfe2a0.00021286JASPAR
CTCF0.00299JASPAR
ELK40.0050466JASPAR
NHLH10.0074248JASPAR

BED file downloads

Download top of 134 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 100199940-100200090PCOLCE56.41
chr7: 100199940-100200090PCOLCE-AS156.41
chr7: 100199940-100200090LRCH456.41
chr5: 131604940-131605090AC034220.356.72
chr5: 93805700-93805850KIAA082559.19
chr13: 31365820-31365970ALOX5AP66.53
chr17: 48641660-48641810EPN368.57
chr19: 887220-887370R3HDM470.72
chr22: 20776960-20777110SCARF272.49
chr22: 20776960-20777110KLHL2272.49
View top connections.

Other

CodePlot