SOM cluster: 1406

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 170
Promoter: 10%
CpG-Island: 2%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.000000000001
Factore-val(match)DB
REL0.0000000000013543JASPAR
NF-kappaB0.0000000000015352JASPAR
RELA0.0000000000085437JASPAR
NFKB10.000000000091401JASPAR
IRF20.0013266JASPAR

BED file downloads

Download top of 170 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151249860-151250010SELENBP130.51
chr1: 151249860-151250010PSMD430.51
chr1: 151249860-151250010RFX530.51
chr1: 154699040-154699190KCNN336.73
chr1: 160708920-160709070CD24440.3
chr1: 160708920-160709070SLAMF740.3
chr1: 160708920-160709070LY940.3
chr1: 160708920-160709070SLAMF140.3
chr1: 160708920-160709070CD4840.3
chr4: 89204540-89204690PPM1K43.68
View top connections.

Other

CodePlot