SOM cluster: 1417

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 213
Promoter: 2%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.2e-24
Factore-val(match)DB
Myf0.0000000063747JASPAR
NHLH10.00000075914JASPAR
TAL1::TCF30.00009642JASPAR
REST0.0027016JASPAR
Myb0.0051721JASPAR
Sites: 12/100 | e-val: 2.7
Factore-val(match)DB
Pax50.00081321JASPAR
Myf0.0096902JASPAR
PPARG::RXRA0.011064JASPAR
SPI10.017147JASPAR
SPIB0.031292JASPAR

BED file downloads

Download top of 213 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 193765240-193765390HES144.67
chr2: 61406400-61406550USP3446.52
chr17: 76272660-76272810SOCS355.62
chr17: 76272660-76272810TMEM23555.62
chr17: 76272660-76272810RN7SL236P55.62
chr11: 72867280-72867430FCHSD258.51
chr22: 22764640-22764790LL22NC03-22A12.1270.5
chr22: 22764640-22764790IGLVI-4270.5
chr6: 24919840-24919990FAM65B73.17
chr12: 92860240-92860390RP11-693J15.573.4
View top connections.

Other

CodePlot