SOM cluster: 1419

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 224
Promoter: 2%
CpG-Island: 0%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.013
Factore-val(match)DB
REST0.0008232JASPAR
TAL1::TCF30.0020906JASPAR
Myf0.0021785JASPAR
NHLH10.0046823JASPAR
NFE2L20.0089577JASPAR

BED file downloads

Download top of 224 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 54466280-54466430RP11-834C11.448.65
chr11: 68803540-68803690MRGPRF50.53
chr11: 68803540-68803690RP11-554A11.650.53
chr11: 68803540-68803690TPCN250.53
chr1: 203265720-203265870RP11-134P9.351.94
chr1: 203265720-203265870FMOD51.94
chr18: 8799980-8800130SOGA255.43
chr4: 8257820-8257970RP11-774O3.358.89
chr4: 8257820-8257970SH3TC158.89
chr4: 8257820-8257970HTRA358.89
View top connections.

Other

CodePlot