SOM cluster: 1422

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 119
Promoter: 52%
CpG-Island: 72%
Conserved: 76%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 0
Factore-val(match)DB
SP10.000000026239JASPAR
Egr10.00061667JASPAR
TFAP2A0.0021663JASPAR
Klf40.0079166JASPAR
RXR::RAR_DR50.023257JASPAR
Sites: 72/100 | e-val: 3.2e-29
Factore-val(match)DB
SP10.0000001366JASPAR
PLAG10.0019208JASPAR
Pax40.0034326JASPAR
Tal1::Gata10.005981JASPAR
EWSR1-FLI10.015264JASPAR

BED file downloads

Download top of 119 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 60705340-60705490MARCH1027.44
chr17: 60705340-60705490MRC227.44
chr11: 66080645-66080795CD24848.14
chr11: 66080645-66080795CNIH248.14
chr11: 66080645-66080795TMEM151A48.14
chr11: 66080645-66080795B3GNT148.14
chr3: 55521560-55521710WNT5A49.99
chr3: 55521560-55521710WNT5A-AS149.99
chr6: 29600605-29600755UBD54.31
chr3: 183874380-183874530ECE257.19
View top connections.

Other

CodePlot