SOM cluster: 1424

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 364
Promoter: 29%
CpG-Island: 79%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000000087831JASPAR
Egr10.0000044503JASPAR
TFAP2A0.00087559JASPAR
Klf40.00095104JASPAR
Zfx0.008737JASPAR
Sites: 54/100 | e-val: 0.000000000000011
Factore-val(match)DB
TFAP2A0.00087755JASPAR
SP10.00499JASPAR
INSM10.018967JASPAR
PLAG10.024285JASPAR
Klf40.056042JASPAR
Sites: 68/100 | e-val: 1.2
Factore-val(match)DB
Pax40.0000061907JASPAR
SP10.00010785JASPAR
TFAP2A0.00048528JASPAR
Klf40.0022233JASPAR
MZF1_1-40.0072558JASPAR

BED file downloads

Download top of 364 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 60031460-60031610RP11-25K19.139.68
chr12: 132313820-132313970ULK148.64
chr12: 132313820-132313970PUS148.64
chr17: 1957620-1957770HIC150.82
chr1: 202776100-202776250PCAT652.94
chr1: 202776100-202776250RP11-480I12.452.94
chr1: 202776100-202776250RP11-480I12.552.94
chr12: 112035500-112035650BRAP55.12
chr12: 112035500-112035650RP11-686G8.155.12
chr16: 88520965-88521115ZNF46955.79
View top connections.

Other

CodePlot