SOM cluster: 1429

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 342
Promoter: 1%
CpG-Island: 0%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.00000000000081
Factore-val(match)DB
Foxd30.00000027449JASPAR
Foxq10.0017824JASPAR
ARID3A0.0020093JASPAR
FOXA10.004589JASPAR
Foxa20.0088465JASPAR

BED file downloads

Download top of 342 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 66747900-66748050PDE4B36.31
chr3: 30269800-30269950U337.27
chr9: 109690340-109690490RP11-508N12.341.04
chr14: 59948780-59948930JKAMP44.06
chr14: 59948780-59948930L3HYPDH44.06
chr14: 59948780-59948930GPR13544.06
chr2: 48118560-48118710AC079807.344.82
chr3: 29735325-29735475RBMS352.34
chr12: 117434600-117434750FBXW855.24
chr1: 145115080-145115230PDE4DIP66.28
View top connections.

Other

CodePlot