SOM cluster: 1434

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 173
Promoter: 0%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.0000038
Factore-val(match)DB
Lhx30.000028132JASPAR
Prrx20.00025993JASPAR
NKX3-10.0016232JASPAR
Foxd30.0038572JASPAR
HNF1A0.0052203JASPAR

BED file downloads

Download top of 173 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 155925840-155925990KCNAB133.64
chr12: 76985360-76985510OSBPL834.76
chr12: 76985360-76985510RP11-20E24.134.76
chr1: 204401040-204401190PIK3C2B45.92
chr1: 204401040-204401190MDM445.92
chr12: 12888360-12888510CREBL247.8
chrX: 3440480-3440630PRKX49.6
chr3: 123535925-123536075MYLK52.31
chr9: 115551900-115552050SNX3052.92
chr15: 101808025-101808175SNRPA155.6
View top connections.

Other

CodePlot