SOM cluster: 1440

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 164
Promoter: 1%
CpG-Island: 1%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.06
Factore-val(match)DB
NFIL30.000021082JASPAR
Lhx30.000047005JASPAR
Prrx20.00031878JASPAR
NR3C10.00045537JASPAR
HLF0.00096761JASPAR

BED file downloads

Download top of 164 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204265500-204265650KISS133.02
chr1: 204265500-204265650GOLT1A33.02
chr13: 39984360-39984510LHFP42.44
chr9: 138951980-138952130UBAC144.58
chr1: 145093240-145093390PDE4DIP51.98
chr1: 145093240-145093390SEC22B51.98
chr19: 34765660-34765810GPI53.18
chr19: 34765660-34765810LSM14A53.18
chr1: 172105180-172105330MIR21453.25
chr1: 172105180-172105330MIR199A253.25
View top connections.

Other

CodePlot