SOM cluster: 1443

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 218
Promoter: 3%
CpG-Island: 0%
Conserved: 84%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 0
Factore-val(match)DB
TAL1::TCF30.00000026245JASPAR
Prrx20.00020484JASPAR
ARID3A0.00023727JASPAR
Pdx10.001224JASPAR
HNF1A0.0014854JASPAR

BED file downloads

Download top of 218 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 120591200-120591350RP11-775B15.344.04
chr8: 120591200-120591350ENPP244.04
chr1: 156771280-156771430ISG20L246.29
chr1: 156771280-156771430CRABP246.29
chr1: 156771280-156771430RRNAD146.29
chr10: 33411040-33411190RP11-462L8.247.02
chr10: 33411040-33411190NRP147.02
chr8: 49817180-49817330SNAI249.55
chr1: 172113800-172113950MIR21450.61
chr1: 172113800-172113950MIR199A250.61
View top connections.

Other

CodePlot