SOM cluster: 1444

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 148
Promoter: 0%
CpG-Island: 0%
Conserved: 78%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.0000013
Factore-val(match)DB
Pou5f10.000015964JASPAR
Foxd30.00027388JASPAR
Sox20.00030633JASPAR
ARID3A0.0067609JASPAR
NFATC20.015746JASPAR
Sites: 15/100 | e-val: 0.21
Factore-val(match)DB
RUNX10.000000065723JASPAR
SOX100.00019914JASPAR
ZNF354C0.0015995JASPAR
HOXA50.0078947JASPAR
RREB10.0084012JASPAR

BED file downloads

Download top of 148 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 121255160-121255310COL14A142.47
chr3: 152020400-152020550MBNL144.75
chr3: 152020400-152020550MBNL1-AS144.75
chr1: 93400360-93400510SNORA5146.42
chr1: 93400360-93400510SNORA6646.42
chr1: 93400360-93400510FAM69A46.42
chr1: 52033420-52033570OSBPL951.72
chr1: 52033420-52033570RP11-191G24.151.72
chr8: 116431840-116431990TRPS165.64
chr20: 37614340-37614490PPP1R16B67.58
View top connections.

Other

CodePlot