SOM cluster: 1457

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 253
Promoter: 6%
CpG-Island: 0%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 1.7e-16
Factore-val(match)DB
SPIB0.000012765JASPAR
SPI10.000036213JASPAR
IRF10.000067018JASPAR
IRF20.00015804JASPAR
FEV0.00016667JASPAR
Sites: 25/100 | e-val: 2.6
Factore-val(match)DB
Pax40.00000011929JASPAR
RREB10.0000013072JASPAR
SP10.0000050279JASPAR
Klf40.000031561JASPAR
Tal1::Gata10.00061216JASPAR

BED file downloads

Download top of 253 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 78400040-78400190GPR17441.6
chr16: 11448940-11449090PRM150.75
chr16: 11448940-11449090SOCS150.75
chr16: 11448940-11449090SNORA4850.75
chr16: 11448940-11449090RMI250.75
chr6: 119131720-119131870ASF1A52.86
chr6: 119131720-119131870MCM952.86
chr7: 102066840-102066990ALKBH454.82
chr7: 102066840-102066990LRWD154.82
chr7: 102066840-102066990RASA4B54.82
View top connections.

Other

CodePlot