SOM cluster: 1459

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 959
Promoter: 7%
CpG-Island: 4%
Conserved: 26%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.00000000008
Factore-val(match)DB
SPIB0.000002355JASPAR
IRF10.000011516JASPAR
EWSR1-FLI10.000096241JASPAR
SPI10.00010647JASPAR
IRF20.0001773JASPAR
Sites: 32/100 | e-val: 0.0076
Factore-val(match)DB
INSM10.0000012998JASPAR
TFAP2A0.00047797JASPAR
ZEB10.0023608JASPAR
EBF10.00324JASPAR
SP10.0036172JASPAR

BED file downloads

Download top of 959 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 144484125-144484275ZC3H339.68
chr6: 119657040-119657190RP3-354N19.340
chr6: 119657040-119657190MAN1A140
chr9: 117416165-117416315RP11-402G3.342.11
chr16: 90053105-90053255CENPBD143.5
chrX: 15809320-15809470CA5BP144.09
chr1: 183536925-183537075NCF244.45
chr1: 230427540-230427690RP5-956O18.347.69
chr12: 108125300-108125450PRDM448.33
chr12: 108125300-108125450RP11-864J10.448.33
View top connections.

Other

CodePlot