SOM cluster: 1464

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 113
Promoter: 14%
CpG-Island: 6%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 6.2e-18
Factore-val(match)DB
NFE2L20.00000000013382JASPAR
AP10.000000022454JASPAR
PPARG0.00018289JASPAR
Pax20.00093571JASPAR
NFE2L1::MafG0.017346JASPAR
Sites: 31/100 | e-val: 0.000000082
Factore-val(match)DB
Klf40.000000025224JASPAR
SP10.00000044956JASPAR
Pax40.00000045314JASPAR
RREB10.000076244JASPAR
Egr10.00013651JASPAR

BED file downloads

Download top of 113 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 96235780-96235930C8orf3733.77
chr8: 96235780-96235930KB-1047C11.233.77
chr19: 13147640-13147790NFIX43.01
chr19: 13147640-13147790LYL143.01
chr19: 13147640-13147790CALR43.01
chr19: 49061480-49061630SEC1P52.42
chr19: 49061480-49061630FAM83E52.42
chr19: 49061480-49061630LMTK352.42
chr3: 159480180-159480330IQCJ-SCHIP153.37
chr17: 43308220-43308370PLCD354.82
View top connections.

Other

CodePlot