SOM cluster: 1471

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 204
Promoter: 5%
CpG-Island: 1%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 2e-28
Factore-val(match)DB
SP10.0000042675JASPAR
EWSR1-FLI10.0000090949JASPAR
Pax40.000011616JASPAR
MZF1_1-40.0023057JASPAR
Klf40.005446JASPAR
Sites: 59/100 | e-val: 6.7e-18
Factore-val(match)DB
Myf0.0000055066JASPAR
NHLH10.000051648JASPAR
Myb0.00030461JASPAR
REST0.00046995JASPAR
TAL1::TCF30.018124JASPAR
Sites: 20/100 | e-val: 0.0000057
Factore-val(match)DB
Stat30.00000063773JASPAR
TEAD10.0000019772JASPAR
NF-kappaB0.000083196JASPAR
SPIB0.000095835JASPAR
REL0.00013257JASPAR
Sites: 25/100 | e-val: 0.76
Factore-val(match)DB
SP10.00000000043545JASPAR
MZF1_1-40.000066178JASPAR
Pax40.00024279JASPAR
Klf40.0021626JASPAR
RXR::RAR_DR50.0061534JASPAR

BED file downloads

Download top of 204 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 8402640-8402790CTA-398F10.260.12
chr11: 125271720-125271870PKNOX261.53
chr21: 38074665-38074815SIM262.43
chr3: 183463160-183463310KLHL2463.48
chr19: 38925220-38925370FAM98C63.68
chr19: 38925220-38925370RYR163.68
chr19: 38925220-38925370CATSPERG63.68
chr3: 138127760-138127910ESYT365.31
chr1: 229570505-229570655ACTA173.15
chr1: 229570505-229570655RN7SKP27673.15
View top connections.

Other

CodePlot