SOM cluster: 1474

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 238
Promoter: 22%
CpG-Island: 31%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 69/100 | e-val: 0
Factore-val(match)DB
SP10.000000026736JASPAR
EWSR1-FLI10.00000032341JASPAR
Pax40.000087729JASPAR
PLAG10.0067935JASPAR
MZF1_1-40.018792JASPAR
Sites: 44/100 | e-val: 3e-22
Factore-val(match)DB
SP10.0044634JASPAR
TLX1::NFIC0.01013JASPAR
Egr10.014019JASPAR
TFAP2A0.035114JASPAR
znf1430.035993JASPAR
Sites: 47/100 | e-val: 0.06
Factore-val(match)DB
SP10.0000071835JASPAR
EWSR1-FLI10.002475JASPAR
PPARG::RXRA0.0045938JASPAR
Stat30.0062099JASPAR
SPIB0.0071903JASPAR
Sites: 22/100 | e-val: 0.00012
Factore-val(match)DB
PLAG10.00072735JASPAR
Myf0.010629JASPAR
SP10.01305JASPAR
AP10.013783JASPAR
Klf40.018262JASPAR
Sites: 22/100 | e-val: 1.3
Factore-val(match)DB
Tcfcp2l10.00039482JASPAR
Egr10.0017416JASPAR
Klf40.0036919JASPAR
Zfx0.0047532JASPAR
TP530.0062185JASPAR

BED file downloads

Download top of 238 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 2752260-2752410C5orf3841.14
chr5: 2752260-2752410RP11-129I19.241.14
chr5: 2752260-2752410IRX241.14
chr1: 78956540-78956690PTGFR43.55
chr21: 47474560-47474710COL6A249.37
chr9: 35791525-35791675SPAG849.68
chr9: 35791525-35791675NPR249.68
chr9: 35791525-35791675RP11-112J3.1649.68
chr3: 194030960-194031110LRRC1549.87
chr19: 10340900-10341050MRPL450.04
View top connections.

Other

CodePlot