SOM cluster: 148

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4421
Promoter: 91%
CpG-Island: 94%
Conserved: 94%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 9.30462e-43
Factore-val(match)DB
Klf40.00000001121JASPAR
SP10.00000019351JASPAR
Zfx0.0026824JASPAR
Egr10.012532JASPAR
PLAG10.020016JASPAR
Sites: 47/100 | e-val: 5.1e-19
Factore-val(match)DB
NFYA0.000000087679JASPAR
NFIC0.00062698JASPAR
Pdx10.0068258JASPAR
PBX10.0074429JASPAR
E2F10.017731JASPAR
Sites: 19/100 | e-val: 0.000000028
Factore-val(match)DB
Egr10.00064171JASPAR
NHLH10.0020949JASPAR
CEBPA0.0081983JASPAR
E2F10.024346JASPAR
TP530.037265JASPAR

BED file downloads

Download top of 4421 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150552060-150552210LINC0056813.11
chr1: 151254340-151254490PI4KB27.2
chr1: 91966280-91966430RP11-47K11.227.22
chr1: 151119140-151119290BNIPL35.41
chr1: 151119140-151119290TMOD435.41
chr1: 151119140-151119290GABPB235.41
chr22: 21271500-21271650P2RX639.33
chr19: 33668080-33668230WDR8839.67
chr5: 175815660-175815810RP11-844P9.340.44
chr8: 95907880-95908030CCNE240.53
View top connections.

Other

CodePlot