SOM cluster: 1485

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 146
Promoter: 0%
CpG-Island: 0%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 0.000000000000027
Factore-val(match)DB
TEAD10.0000014151JASPAR
EWSR1-FLI10.00038813JASPAR
Foxa20.0016873JASPAR
Sox20.005138JASPAR
FOXA10.0057337JASPAR
Sites: 31/100 | e-val: 0.71
Factore-val(match)DB
Foxq10.0018994JASPAR
Foxd30.024314JASPAR
Evi10.026628JASPAR
HNF1A0.02994JASPAR
MEF2A0.030464JASPAR
Sites: 11/100 | e-val: 0.92
Factore-val(match)DB
NKX3-10.0065044JASPAR
AP10.0099292JASPAR
IRF10.014774JASPAR
NFATC20.017785JASPAR
RELA0.019349JASPAR

BED file downloads

Download top of 146 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 13941600-13941750COX1035.73
chr12: 48297020-48297170COL2A147.14
chr12: 48297020-48297170VDR47.14
chr5: 72485720-72485870TMEM17157.36
chr5: 72485720-72485870RP11-232L2.257.36
chr3: 134181340-134181490HMGB3P1358.01
chr3: 134181340-134181490AMOTL258.01
chr3: 173988740-173988890NLGN158.96
chr8: 109046060-109046210RSPO265.95
chr12: 117421040-117421190FBXW866.78
View top connections.

Other

CodePlot