SOM cluster: 1505

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 407
Promoter: 31%
CpG-Island: 24%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.000000023
Factore-val(match)DB
SP10.00000031816JASPAR
EWSR1-FLI10.000002613JASPAR
Pax40.000046247JASPAR
RREB10.00058544JASPAR
Klf40.00069065JASPAR

BED file downloads

Download top of 407 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145438945-145439095RBM8A19.51
chr1: 145438945-145439095RP11-315I20.119.51
chr3: 38204720-38204870ACAA139.09
chr3: 50648100-50648250CISH44.28
chr3: 50648100-50648250MAPKAPK344.28
chr6: 31549360-31549510AIF147.51
chr2: 38977780-38977930ASS1P250.6
chr2: 101923000-101923150RFX851.53
chr11: 65661760-65661910MUS8152.73
chr11: 65661760-65661910CCDC85B52.73
View top connections.

Other

CodePlot