SOM cluster: 1509

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 360
Promoter: 34%
CpG-Island: 77%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 7.4e-28
Factore-val(match)DB
SP10.000063351JASPAR
TFAP2A0.006022JASPAR
Zfx0.0072857JASPAR
PLAG10.0095417JASPAR
Egr10.023624JASPAR
Sites: 38/100 | e-val: 1.7
Factore-val(match)DB
EWSR1-FLI10.000020219JASPAR
SP10.0029681JASPAR
Pax40.0050142JASPAR
SPI10.0078955JASPAR
SPIB0.0098037JASPAR

BED file downloads

Download top of 360 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 34919005-34919155PDCD2L37.03
chr19: 34919005-34919155UBA237.03
chr19: 34919005-34919155GPI37.03
chr12: 120876080-120876230TRIAP137.43
chr12: 102455500-102455650RP11-554E23.343.17
chrX: 70503620-70503770RP5-1091N2.944.79
chr2: 71357160-71357310MPHOSPH1048.46
chr2: 71357160-71357310OR7E62P48.46
chr5: 180687800-180687950TRIM52-AS148.63
chr5: 180687800-180687950CTC-338M12.648.63
View top connections.

Other

CodePlot