SOM cluster: 1513

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 283
Promoter: 0%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.000000000012
Factore-val(match)DB
TLX1::NFIC0.000000013999JASPAR
NFIC0.0013426JASPAR
E2F10.02869JASPAR
NFATC20.035052JASPAR
SOX100.047627JASPAR
Sites: 19/100 | e-val: 0.011
Factore-val(match)DB
Pou5f10.0000097219JASPAR
NFATC20.00002094JASPAR
Sox20.000027699JASPAR
IRF10.00017252JASPAR
IRF20.0017581JASPAR
Sites: 20/100 | e-val: 0.51
Factore-val(match)DB
Foxd30.00040583JASPAR
HNF1B0.00083481JASPAR
Foxq10.0010706JASPAR
Pax40.0038738JASPAR
Lhx30.0051095JASPAR

BED file downloads

Download top of 283 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 109683780-109683930RP11-508N12.227.14
chr7: 42036420-42036570GLI340.62
chr17: 56864420-56864570TEX1442.19
chr8: 121873660-121873810SNTB143.14
chr7: 127906940-127907090LEP49.87
chr10: 17390720-17390870ST8SIA6-AS154.17
chr7: 73892160-73892310GTF2IRD156.35
chr4: 187590700-187590850FAT158.19
chr10: 114818540-114818690TCF7L260.84
chr1: 179138900-179139050SETP1062.37
View top connections.

Other

CodePlot