SOM cluster: 1516

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 175
Promoter: 2%
CpG-Island: 0%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
Myf0.0000010751JASPAR
NHLH10.0000039843JASPAR
TAL1::TCF30.000059572JASPAR
Myb0.002888JASPAR
Spz10.0061475JASPAR
Sites: 19/100 | e-val: 0.49
Factore-val(match)DB
Evi10.00050824JASPAR
FOXA10.0010325JASPAR
SPIB0.00141JASPAR
NFATC20.0040604JASPAR
Foxa20.018181JASPAR

BED file downloads

Download top of 175 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 180190740-180190890RP5-1180C10.251.5
chr22: 20909680-20909830KRT18P553.65
chr17: 62057800-62057950SCN4A62.3
chr17: 76957100-76957250TIMP264.12
chr17: 76957100-76957250DDC864.12
chr19: 36596920-36597070CLIP366.59
chr19: 36596920-36597070SYNE466.59
chr19: 36596920-36597070WDR6266.59
chr3: 13641280-13641430HDAC1167.04
chr15: 83563860-83564010WHAMM74.31
View top connections.

Other

CodePlot