SOM cluster: 1525

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2723
Promoter: 10%
CpG-Island: 10%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.0000082852JASPAR
PLAG10.000093363JASPAR
TFAP2A0.00011766JASPAR
RREB10.0013703JASPAR
CTCF0.0020303JASPAR
Sites: 69/100 | e-val: 5.1e-17
Factore-val(match)DB
INSM10.00000061111JASPAR
TLX1::NFIC0.000016199JASPAR
HNF4A0.000081124JASPAR
PPARG::RXRA0.000088527JASPAR
CTCF0.00069908JASPAR
Sites: 25/100 | e-val: 1.8
Factore-val(match)DB
REST0.00049803JASPAR
RXR::RAR_DR50.0069771JASPAR
REL0.0094087JASPAR
TP530.0097045JASPAR
Zfx0.017618JASPAR

BED file downloads

Download top of 2723 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 102881385-102881535TLX1NB29.78
chr9: 139329205-139329355SEC16A33.81
chr17: 79135365-79135515ENTHD237.98
chr8: 21991505-21991655LGI354.03
chr19: 35842105-35842255FFAR155.04
chr19: 35842105-35842255CD2255.04
chr12: 49431885-49432035PRKAG155.25
chr9: 139578620-139578770ATP6V1G1P356.33
chr3: 129330285-129330435RHO56.93
chr8: 143846465-143846615GML57.21
View top connections.

Other

CodePlot