SOM cluster: 1541

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 159
Promoter: 0%
CpG-Island: 0%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000002
Factore-val(match)DB
Gata10.0000000019234JASPAR
Evi10.00000013278JASPAR
Tal1::Gata10.000027856JASPAR
GATA20.0024109JASPAR
GATA30.0071318JASPAR
Sites: 19/100 | e-val: 0.61
Factore-val(match)DB
Pax40.0000093039JASPAR
Pou5f10.00035581JASPAR
Sox20.0036232JASPAR
Prrx20.0041532JASPAR
HNF1A0.0066645JASPAR

BED file downloads

Download top of 159 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 47610260-47610410TNS344.08
chr7: 47610260-47610410AC095067.144.08
chr1: 202475120-202475270RP11-175B9.252.03
chr8: 18894080-18894230PSD360.9
chr8: 37374840-37374990RP11-150O12.661.46
chr8: 37374840-37374990RP11-150O12.161.46
chr11: 130397740-130397890ADAMTS1562.22
chr11: 130397740-130397890BAK1P262.22
chr1: 218543140-218543290TGFB264.78
chr12: 27996720-27996870MANSC467.51
View top connections.

Other

CodePlot