SOM cluster: 1568

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1155
Promoter: 0%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0.0000000003
Factore-val(match)DB
Foxd30.000017737JASPAR
HNF1B0.00070508JASPAR
HNF1A0.0010085JASPAR
FOXI10.0010637JASPAR
Lhx30.0011345JASPAR

BED file downloads

Download top of 1155 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92268760-92268910TGFBR37.93
chr3: 15862540-15862690AC090945.139.27
chr3: 15862540-15862690ANKRD2839.27
chr11: 15141040-15141190INSC41.74
chr12: 29763800-29763950TMTC147.49
chr9: 33402440-33402590AQP751.86
chr6: 35553580-35553730RP3-340B19.554.21
chr14: 44757140-44757290RP11-305B6.357.98
chr2: 191347380-191347530AC093388.363.26
chr3: 12280860-12281010PPARG66.2
View top connections.

Other

CodePlot