SOM cluster: 1589

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 73
Promoter: 1%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 17/73 | e-val: 0.0025
Factore-val(match)DB
TLX1::NFIC0.00000000093359JASPAR
PPARG::RXRA0.00046734JASPAR
NFIC0.0014114JASPAR
PLAG10.006554JASPAR
TFAP2A0.007201JASPAR

BED file downloads

Download top of 73 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 78042580-78042730GAA51.65
chr8: 95980240-95980390TP53INP161.1
chr8: 95980240-95980390INTS861.1
chr20: 50361180-50361330ATP9A78.4
chr14: 23446020-23446170PSMB581.02
chr14: 23446020-23446170RP11-298I3.481.02
chr14: 23446020-23446170AJUBA81.02
chr14: 23446020-23446170CDH2481.02
chr14: 23446020-23446170RBM2381.02
chr14: 23446020-23446170PRMT5-AS181.02
View top connections.

Other

CodePlot