SOM cluster: 1608

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 271
Promoter: 26%
CpG-Island: 3%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.000000000013
Factore-val(match)DB
IRF10.00000000047547JASPAR
IRF20.000000028845JASPAR
ELK40.012239JASPAR
SPIB0.017024JASPAR
GABPA0.037892JASPAR
Sites: 14/100 | e-val: 0.000044
Factore-val(match)DB
FOXA10.000098146JASPAR
FOXF20.00015344JASPAR
Foxd30.00020408JASPAR
Foxq10.00032679JASPAR
IRF10.00057754JASPAR

BED file downloads

Download top of 271 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 48499180-48499330RP1-228P16.126.04
chr12: 48499180-48499330SENP126.04
chr12: 48499180-48499330C12orf6826.04
chr10: 22919505-22919655PIP4K2A29.34
chr8: 102216660-102216810ZNF70649.18
chr12: 112568240-112568390TRAFD149.52
chr2: 157293320-157293470GPD252.62
chr2: 157293320-157293470snoU1352.62
chr19: 49100425-49100575SULT2B154.99
chr19: 49100425-49100575FUT254.99
View top connections.

Other

CodePlot