SOM cluster: 1619

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 338
Promoter: 2%
CpG-Island: 0%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.3e-19
Factore-val(match)DB
Myf0.00000099361JASPAR
TAL1::TCF30.0000016658JASPAR
NHLH10.0000048484JASPAR
Spz10.00054266JASPAR
Myb0.0025663JASPAR
Sites: 21/100 | e-val: 0.32
Factore-val(match)DB
TEAD10.00019292JASPAR
Stat30.00064058JASPAR
NFATC20.0040429JASPAR
ELK40.014026JASPAR
HOXA50.01471JASPAR

BED file downloads

Download top of 338 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 87892320-87892470CA5A52.35
chr1: 154509160-154509310ADAR65.95
chr1: 154509160-154509310UBE2Q165.95
chr15: 79540640-79540790ANKRD34C74.18
chr17: 48508180-48508330MRPL2776.02
chr15: 33427585-33427735FMN180.44
chr22: 28358565-28358715PITPNB81
chr12: 54358260-54358410HOTAIR81.75
chr12: 54358260-54358410HOXC1081.75
chr12: 54358260-54358410HOXC681.75
View top connections.

Other

CodePlot