SOM cluster: 1639

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 215
Promoter: 1%
CpG-Island: 0%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000000011
Factore-val(match)DB
Foxq10.000048747JASPAR
FOXI10.00006166JASPAR
ARID3A0.00030038JASPAR
FOXA10.00030108JASPAR
Foxd30.00049918JASPAR
Sites: 54/100 | e-val: 0.00011
Factore-val(match)DB
TAL1::TCF30.000000085335JASPAR
NHLH10.0023882JASPAR
T0.0083366JASPAR
ELK40.0094611JASPAR
Hand1::Tcfe2a0.016356JASPAR

BED file downloads

Download top of 215 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156775905-156776055HDGF38.7
chr1: 156775905-156776055SH2D2A38.7
chr1: 156775905-156776055PRCC38.7
chr1: 156775905-156776055ISG20L238.7
chr4: 87756305-87756455PTPN1344.27
chr2: 66671240-66671390MEIS1-AS250.95
chr2: 66671240-66671390MEIS150.95
chr13: 51011500-51011650RPL34P2656.17
chr13: 34087080-34087230RP11-37L2.156.93
chr8: 13015420-13015570DLC157.34
View top connections.

Other

CodePlot