SOM cluster: 1666

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 158
Promoter: 5%
CpG-Island: 0%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0000019
Factore-val(match)DB
ARID3A0.0020072JASPAR
Foxd30.010346JASPAR
Sox20.012074JASPAR
IRF10.013703JASPAR
MEF2A0.018325JASPAR
Sites: 25/100 | e-val: 0.76
Factore-val(match)DB
AP10.000000002719JASPAR
NFE2L20.000000013055JASPAR
NFE2L1::MafG0.00010292JASPAR
PBX10.0013672JASPAR
Pax60.013801JASPAR

BED file downloads

Download top of 158 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 65736220-65736370RP11-305P14.128.92
chr3: 156333440-156333590SSR333.51
chr10: 93643460-93643610FGFBP350.08
chr10: 93643460-93643610TNKS2-AS150.08
chr11: 14468300-14468450RRAS261.9
chr1: 67006420-67006570SGIP165.52
chr9: 2810160-2810310KCNV265.74
chr11: 3094265-3094415NAP1L470.89
chr5: 139570240-139570390LINC0102471.51
chr1: 210057000-210057150C1orf7474.98
View top connections.

Other

CodePlot