SOM cluster: 1674

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 269
Promoter: 7%
CpG-Island: 0%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.25
Factore-val(match)DB
NR1H2::RXRA1.1102e-16JASPAR
PPARG::RXRA0.0000000000043795JASPAR
NR2F10.0000000000071346JASPAR
HNF4A0.000000000015647JASPAR
NR4A20.00000008026JASPAR

BED file downloads

Download top of 269 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 47215460-47215610PACSIN339.04
chr11: 47215460-47215610NR1H339.04
chr11: 47215460-47215610ACP239.04
chr11: 66627205-66627355LRFN442.72
chr11: 66627205-66627355RCE142.72
chr11: 66627205-66627355PC42.72
chr17: 73575080-73575230TSEN5452.9
chr17: 73575080-73575230SAP30BP52.9
chr5: 75768520-75768670RP11-156N15.153.15
chr10: 104881220-104881370NT5C254.63
View top connections.

Other

CodePlot