SOM cluster: 1677

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 327
Promoter: 2%
CpG-Island: 1%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.000005
Factore-val(match)DB
Foxd30.00016046JASPAR
HNF1B0.00092407JASPAR
Foxq10.0015122JASPAR
ARID3A0.0031353JASPAR
NR3C10.0048129JASPAR

BED file downloads

Download top of 327 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 31978820-31978970OSBPL1030.82
chr3: 15675440-15675590ANKRD2847.77
chr7: 134218220-134218370AKR1B152.07
chr12: 24652480-24652630RP11-444D3.158.49
chr7: 129916520-129916670TMEM20958.83
chr7: 129916520-129916670CPA258.83
chr3: 37239945-37240095GOLGA462.69
chr3: 37239945-37240095UBE2FP162.69
chr3: 37239945-37240095AC097359.262.69
chr3: 37239945-37240095LRRFIP262.69
View top connections.

Other

CodePlot