SOM cluster: 1697

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 385
Promoter: 1%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 3.6e-21
Factore-val(match)DB
Lhx30.00029585JASPAR
MEF2A0.0006639JASPAR
ARID3A0.0016983JASPAR
HNF1B0.0069214JASPAR
Prrx20.015887JASPAR

BED file downloads

Download top of 385 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 15844740-15844890ITGA848.72
chr10: 15844740-15844890FAM188A48.72
chr12: 112080560-112080710RP11-686G8.151.05
chr11: 28031620-28031770METTL1552.26
chr4: 8402500-8402650RP11-774O3.355.98
chr3: 99148460-99148610RP11-779P15.262.78
chr8: 72395840-72395990RP11-1102P16.166.17
chr9: 98902600-98902750Y_RNA66.42
chr3: 24548880-24549030THRB-IT171.2
chr3: 24548880-24549030THRB71.2
View top connections.

Other

CodePlot