SOM cluster: 1702

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 730
Promoter: 1%
CpG-Island: 1%
Conserved: 21%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0092
Factore-val(match)DB
AP10.000000039023JASPAR
NFE2L20.0000058574JASPAR
SOX100.0017877JASPAR
ESR20.001892JASPAR
Sox170.0032701JASPAR

BED file downloads

Download top of 730 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147718365-147718515RP11-301M17.117.31
chr3: 48630280-48630430SHISA536.54
chr3: 48630280-48630430UCN236.54
chr1: 94089080-94089230BCAR338.74
chr7: 45073165-45073315SNORA5A46.96
chr19: 56002565-56002715SSC5D47.43
chr20: 32268445-32268595PXMP452.25
chr1: 151285020-151285170PI4KB53.95
chr22: 20242020-20242170LINC0089655.12
chr22: 20242020-20242170XXbac-B444P24.855.12
View top connections.

Other

CodePlot