SOM cluster: 1709

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 283
Promoter: 16%
CpG-Island: 8%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 8.1e-28
Factore-val(match)DB
SP10.00000000097976JASPAR
Klf40.000000022784JASPAR
Pax40.0037244JASPAR
Egr10.010525JASPAR
RREB10.014894JASPAR
Sites: 24/100 | e-val: 0.0014
Factore-val(match)DB
SP10.000098935JASPAR
Klf40.003991JASPAR
Hand1::Tcfe2a0.010459JASPAR
NFIC0.015562JASPAR
RREB10.040737JASPAR
Sites: 23/100 | e-val: 0.0035
Factore-val(match)DB
Pax40.000001782JASPAR
SP10.0000076696JASPAR
EWSR1-FLI10.000015705JASPAR
PLAG10.0003777JASPAR
PPARG::RXRA0.00071994JASPAR

BED file downloads

Download top of 283 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 74935265-74935415ARRB125.41
chr17: 18160905-18161055FLII39.71
chr1: 203483445-203483595PRELP42.53
chr4: 190643420-190643570RNU1-51P51.2
chr8: 21985805-21985955DMTN51.54
chr8: 21985805-21985955PHYHIP51.54
chr1: 1280940-1281090DVL158.36
chr17: 73872060-73872210TRIM6558.76
chr17: 73872060-73872210WBP258.76
chr17: 73872060-73872210FBF158.76
View top connections.

Other

CodePlot