SOM cluster: 1711

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 320
Promoter: 4%
CpG-Island: 0%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.023
Factore-val(match)DB
SOX100.000084391JASPAR
SOX90.00018801JASPAR
Sox20.00040738JASPAR
NR3C10.0023991JASPAR
SRY0.007401JASPAR

BED file downloads

Download top of 320 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 174320360-174320510SCRG149.07
chr3: 153074860-153075010RP11-292E2.150.07
chr7: 111033320-111033470AC003989.451.59
chr1: 201469500-201469650RP11-134G8.255.15
chr1: 201469500-201469650RP11-134G8.655.15
chr6: 39723160-39723310DAAM263.22
chr6: 11023380-11023530ELOVL264.02
chr1: 153725420-153725570GATAD2B64.67
chr1: 153725420-153725570INTS364.67
chr1: 153725420-153725570SNAPIN64.67
View top connections.

Other

CodePlot