SOM cluster: 172

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 116
Promoter: 16%
CpG-Island: 4%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.0003
Factore-val(match)DB
AP10.000000000026081JASPAR
NFE2L20.0000000053154JASPAR
PPARG0.0032535JASPAR
NFE2L1::MafG0.0048552JASPAR
Foxa20.011649JASPAR
Sites: 22/100 | e-val: 0.042
Factore-val(match)DB
SPI10.000000024335JASPAR
SPIB0.00001129JASPAR
FEV0.000016549JASPAR
ELK40.00016516JASPAR
ELF50.00018392JASPAR

BED file downloads

Download top of 116 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr22: 37518360-37518510SSTR337.57
chr22: 37518360-37518510IL2RB37.57
chr17: 73685760-73685910RECQL544.91
chr17: 73685760-73685910SAP30BP44.91
chr1: 1186380-1186530MIR42947.91
chr1: 1186380-1186530PUSL147.91
chr1: 1186380-1186530FAM132A47.91
chr19: 42703820-42703970POU2F257.05
chr19: 42703820-42703970CTC-378H22.157.05
chr19: 660460-660610HCN258.1
View top connections.

Other

CodePlot