SOM cluster: 1724

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 14267
Promoter: 2%
CpG-Island: 0%
Conserved: 16%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 1.1e-19
Factore-val(match)DB
Foxd30.0000049897JASPAR
Lhx30.000081832JASPAR
Pou5f10.00046866JASPAR
SRY0.00057696JASPAR
Foxq10.0014431JASPAR

BED file downloads

Download top of 14267 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92079665-92079815RP11-47K11.210.52
chr1: 145469705-145469855ANKRD34A12.94
chr1: 150957920-150958070PRUNE13.15
chr1: 150957920-150958070RP11-316M1.1213.15
chr1: 150957920-150958070ANXA913.15
chr1: 150957920-150958070CERS213.15
chr1: 150957920-150958070MLLT1113.15
chr1: 150553645-150553795MCL113.29
chr1: 150668880-150669030ENSA17.17
chr1: 150668880-150669030HORMAD117.17
View top connections.

Other

CodePlot