SOM cluster: 173

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 553
Promoter: 2%
CpG-Island: 1%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.018
Factore-val(match)DB
IRF10.000035392JASPAR
Pou5f10.0032071JASPAR
IRF20.0035304JASPAR
NFATC20.0056056JASPAR
SOX100.0064307JASPAR
Sites: 38/100 | e-val: 0.002
Factore-val(match)DB
Pax60.00054864JASPAR
T0.0022331JASPAR
NKX3-10.0059763JASPAR
Tcfcp2l10.019533JASPAR
IRF20.021538JASPAR

BED file downloads

Download top of 553 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 27361080-27361230STK38L32.12
chr8: 142416380-142416530MROH536.64
chr8: 142416380-142416530PTP4A336.64
chr3: 128166420-128166570EEFSEC39.03
chr3: 128166420-128166570RP11-475N22.439.03
chr3: 128166420-128166570GATA239.03
chr3: 128166420-128166570TMED10P239.03
chr3: 128166420-128166570DNAJB8-AS139.03
chr7: 55584940-55585090VOPP142.2
chr17: 62009685-62009835CD79B47.57
View top connections.

Other

CodePlot