SOM cluster: 1738

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 5138
Promoter: 1%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 1.2e-18
Factore-val(match)DB
Foxd30.0000016024JASPAR
MEF2A0.000043589JASPAR
Foxq10.00027501JASPAR
Nkx2-50.00028009JASPAR
SRY0.00031245JASPAR

BED file downloads

Download top of 5138 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 53897600-53897750CHAC230.71
chr9: 113353160-113353310RP11-410K21.235.52
chr12: 1850520-1850670CACNA2D441.61
chr16: 86464520-86464670FOXF146.87
chr2: 66929520-66929670AC007392.347.97
chr1: 209894260-209894410HSD11B148.52
chr15: 85862580-85862730ADAMTS7P448.85
chr1: 166958340-166958490MAEL50.33
chr7: 116865665-116865815WNT250.71
chr9: 113205560-113205710RNU6-1039P51.18
View top connections.

Other

CodePlot