SOM cluster: 1762

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 263
Promoter: 3%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000013
Factore-val(match)DB
Lhx30.00026117JASPAR
SPIB0.0011162JASPAR
HNF1A0.015017JASPAR
HNF1B0.022246JASPAR
FEV0.026364JASPAR
Sites: 25/100 | e-val: 0.00041
Factore-val(match)DB
SOX100.0000013934JASPAR
CREB10.00015314JASPAR
SOX90.0021627JASPAR
NFE2L1::MafG0.0029575JASPAR
Sox170.0051029JASPAR
Sites: 34/100 | e-val: 0.28
Factore-val(match)DB
IRF10.00059169JASPAR
NFIC0.00096141JASPAR
E2F10.0010114JASPAR
SOX100.002026JASPAR
RORA_10.0047197JASPAR

BED file downloads

Download top of 263 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 40302620-40302770LRRC4C30.42
chr17: 72268100-72268250TTYH258.55
chr11: 16378060-16378210SOX662.89
chr3: 173629340-173629490NLGN1-AS163.72
chr3: 173629340-173629490NLGN163.72
chr6: 151096640-151096790PLEKHG169.98
chr5: 73921760-73921910ENC170.77
chr3: 89070740-89070890EPHA376.78
chr20: 56260380-56260530PMEPA179.74
chr17: 9072480-9072630NTN181.55
View top connections.

Other

CodePlot