SOM cluster: 1774

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 165
Promoter: 4%
CpG-Island: 1%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.00092
Factore-val(match)DB
CEBPA0.0000000060951JASPAR
HLF0.000025719JASPAR
NFIL30.00052761JASPAR
Pou5f10.0013048JASPAR
Sox20.0017387JASPAR

BED file downloads

Download top of 165 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 133406460-133406610snoU1339.34
chr19: 11300320-11300470SPC2447.59
chr19: 11300320-11300470KANK247.59
chr12: 29866040-29866190TMTC160.71
chr3: 158450545-158450695RARRES162.53
chr3: 158450545-158450695GFM162.53
chr1: 196515880-196516030KCNT266.24
chr2: 74466080-74466230SLC4A571.4
chr17: 7685680-7685830KDM6B74.46
chr14: 76026445-76026595JDP277
View top connections.

Other

CodePlot