SOM cluster: 178

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 97
Promoter: 10%
CpG-Island: 1%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/97 | e-val: 1.4e-28
Factore-val(match)DB
SPIB0.00000005189JASPAR
SPI10.0000034415JASPAR
IRF10.000038505JASPAR
IRF20.00010473JASPAR
EWSR1-FLI10.00041505JASPAR
Sites: 37/97 | e-val: 0.000000029
Factore-val(match)DB
RUNX10.00000045959JASPAR
RREB10.00029742JASPAR
ZNF354C0.0021023JASPAR
Tcfcp2l10.0056481JASPAR
IRF20.012685JASPAR

BED file downloads

Download top of 97 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 76755500-76755650RNU6-638P40.35
chr17: 76755500-76755650CYTH140.35
chr16: 30727160-30727310ZNF62948.94
chr12: 112195640-112195790ACAD1051.77
chr2: 169346560-169346710CERS660.2
chrX: 122918800-122918950Y_RNA61.71
chr6: 41903885-41904035BYSL61.87
chr6: 41903885-41904035CCND361.87
chr17: 74242480-74242630QRICH262.51
chr17: 74242480-74242630RNF15762.51
View top connections.

Other

CodePlot