SOM cluster: 1783

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 138
Promoter: 4%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 0.000000000013
Factore-val(match)DB
CEBPA0.00000001535JASPAR
NFATC20.00038344JASPAR
HLF0.0012038JASPAR
Ddit3::Cebpa0.0046042JASPAR
NFIL30.0064779JASPAR
Sites: 23/100 | e-val: 1.1
Factore-val(match)DB
Foxq10.0000094922JASPAR
Foxd30.000032567JASPAR
Lhx30.0010742JASPAR
MEF2A0.0012222JASPAR
HNF1B0.0026337JASPAR

BED file downloads

Download top of 138 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 136676620-136676770IL20RB45.82
chr1: 90013225-90013375RP11-413E1.451.46
chr1: 201435760-201435910PHLDA355.81
chr1: 201435760-201435910RP11-134G8.855.81
chr4: 88452120-88452270SPARCL160.86
chr1: 109424100-109424250STXBP362.3
chr11: 57047280-57047430TNKS1BP163.52
chr11: 57047280-57047430SSRP163.52
chr11: 57047280-57047430LRRC5563.52
chr11: 57047280-57047430APLNR63.52
View top connections.

Other

CodePlot