SOM cluster: 1785

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 295
Promoter: 0%
CpG-Island: 0%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.061
Factore-val(match)DB
Lhx30.000016456JASPAR
Prrx20.00015457JASPAR
TAL1::TCF30.00015693JASPAR
Pdx10.00030444JASPAR
Nkx2-50.0011695JASPAR

BED file downloads

Download top of 295 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 135737840-135737990PPP2R3A38.05
chr8: 36985220-36985370RP11-419C23.151.36
chr3: 8785225-8785375RAD1860.09
chr3: 8785225-8785375OXTR60.09
chr11: 102714360-102714510MMP361.5
chr11: 102714360-102714510MMP161.5
chr6: 116889400-116889550FAM26E68.18
chr3: 156207540-156207690KCNAB168.96
chr3: 156207540-156207690SSR368.96
chr1: 33983320-33983470CSMD270.75
View top connections.

Other

CodePlot