SOM cluster: 1795

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 800
Promoter: 1%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.00000000000044
Factore-val(match)DB
Sox20.0024255JASPAR
Foxq10.0026996JASPAR
Foxd30.0028864JASPAR
NFATC20.0044663JASPAR
MEF2A0.0051353JASPAR
Sites: 29/100 | e-val: 0.00000000066
Factore-val(match)DB
CEBPA0.000000030709JASPAR
HNF1B0.0027397JASPAR
Ddit3::Cebpa0.0027954JASPAR
HLF0.0037457JASPAR
Sox50.0060566JASPAR

BED file downloads

Download top of 800 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 38721640-38721790AMPH45.06
chr1: 65971740-65971890LEPR47.25
chr1: 65971740-65971890RP11-430H12.247.25
chr18: 25642500-25642650CDH248.46
chr4: 41209360-41209510UCHL152.18
chr11: 121496620-121496770SORL152.26
chr8: 57471920-57472070LINC0096854.67
chr8: 57471920-57472070RP11-17A4.354.67
chr11: 130425480-130425630ADAMTS1555.57
chr8: 52771420-52771570PCMTD157.05
View top connections.

Other

CodePlot