SOM cluster: 1812

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 970
Promoter: 0%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.7e-34
Factore-val(match)DB
SOX100.0000068543JASPAR
Foxd30.00031004JASPAR
SRY0.0032816JASPAR
SOX90.0065511JASPAR
Sox20.0066315JASPAR

BED file downloads

Download top of 970 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 55954940-55955090NEDD4L46.2
chr16: 524660-524810PIGQ46.28
chr16: 524660-524810RAB11FIP346.28
chr16: 524660-524810TMEM8A46.28
chr12: 102009765-102009915CHPT148.8
chr1: 161283465-161283615SDHC49.88
chr1: 161283465-161283615APOA249.88
chr1: 161283465-161283615MPZ49.88
chr3: 133436360-133436510TF52.84
chr3: 133436360-133436510RP11-404G16.252.84
View top connections.

Other

CodePlot