SOM cluster: 1819

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 388
Promoter: 1%
CpG-Island: 0%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 8/100 | e-val: 0.34
Factore-val(match)DB
MEF2A0.001469JASPAR
HNF1B0.0016488JASPAR
ARID3A0.0024717JASPAR
Foxd30.0038159JASPAR
Lhx30.0055309JASPAR

BED file downloads

Download top of 388 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 126020080-126020230RP11-71E19.135.42
chr4: 169706360-169706510RPL9P1652.29
chr13: 51865640-51865790SERPINE356.71
chr3: 21707040-21707190ZNF385D58.01
chr12: 5065320-5065470KCNA166.39
chr4: 66210240-66210390EPHA570.63
chr7: 20347520-20347670ITGB875.9
chr6: 138891920-138892070NHSL181.07
chr3: 194233780-194233930AC108676.182.58
chr11: 115478760-115478910RP11-136I14.487.8
View top connections.

Other

CodePlot