SOM cluster: 1822

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 567
Promoter: 2%
CpG-Island: 0%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 36/100 | e-val: 0.0013
Factore-val(match)DB
HNF1B0.000000070637JASPAR
Foxq10.00018115JASPAR
HNF1A0.00018206JASPAR
MEF2A0.0002157JASPAR
ARID3A0.0020449JASPAR
Sites: 35/100 | e-val: 0.0015
Factore-val(match)DB
AP10.00000000070302JASPAR
NFE2L20.0000012065JASPAR
PPARG0.0002917JASPAR
PBX10.014556JASPAR
NFE2L1::MafG0.014586JASPAR

BED file downloads

Download top of 567 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 120220200-120220350RP11-4K16.228.03
chr8: 120190780-120190930MAL242.75
chr12: 27240940-27241090TM7SF343.97
chr5: 95671700-95671850RP11-254I22.251.58
chr11: 35297845-35297995CD4452.38
chr2: 26565900-26566050EPT158.63
chr2: 26565900-26566050HADHA58.63
chr4: 166290760-166290910MSMO160.22
chr4: 166290760-166290910CPE60.22
chr4: 166290760-166290910HADHAP160.22
View top connections.

Other

CodePlot