SOM cluster: 185

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 262
Promoter: 54%
CpG-Island: 93%
Conserved: 80%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 93/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00035234JASPAR
SP10.002037JASPAR
PLAG10.030934JASPAR
E2F10.035779JASPAR
CTCF0.050997JASPAR
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.000046701JASPAR
TFAP2A0.002984JASPAR
PLAG10.011528JASPAR
Klf40.015273JASPAR
NHLH10.021321JASPAR
Sites: 56/100 | e-val: 0.00000027
Factore-val(match)DB
TFAP2A0.000001921JASPAR
SP10.000002978JASPAR
Egr10.0048673JASPAR
CTCF0.0067927JASPAR
PLAG10.010396JASPAR

BED file downloads

Download top of 262 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 8243940-8244090SGK22337.04
chr8: 42195860-42196010POLB40.53
chr19: 14116705-14116855PODNL144.92
chr11: 61447760-61447910RPLP0P248.69
chr1: 67396025-67396175WDR7850.6
chr7: 33149080-33149230BBS959.08
chr7: 33149080-33149230RP959.08
chr7: 107220560-107220710DUS4L60.39
chr1: 805220-805370RP11-54O7.360.73
chr1: 805220-805370LINC0011560.73
View top connections.

Other

CodePlot